Function reference • BSA

All functions

analyzer(): Analyze stuff

bin_variants(): Bin Variants

collapse_bsa_data(): Collapse BSA (Bulk Segregant Analysis) Data

getG_local(): get G prime stat

getPvals_local(): get g prime pvals

picker2(): Transform VCF Table for QTLseqR

runGprimeAnalysis_local(): QTLseqr like G prime analysis

runQTLseqAnalysis_local(): Identify QTL using a smoothed G statistic

sample_comparison_frame(): Create Sample Comparison Frame

set_genotype(): Set Filt_Genotype column

simulateConfInt_local(): a simulate function

simulateSNPindex_local(): simulate snp index

tidy_metrics(): Tidy data from gds file

tile_metrics(): Tile Metrics Dataframe

tricubeStat_local(): calc tricube stat

vcf_to_qtlseqr_table(): VCF to QTLseqR table